ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A175VSB5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A175VSB5_F1_nD2

A0A175VSB5_F1_nD2

UID: 004021288

AlphaFold

Range: 391-465
AlphaFold: AF-A0A175VSB5
UniProt: A0A175VSB5 (all domains)
Gene: MMYC01_209437

Protein: Pre-mRNA-splicing factor sap61

3D Structure

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Related Domains

Browse other domains in SF3a60_Prp9_C →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilySF3a60_Prp9_C(386.1.1.215)

Pfam Families

PF11931SF3a60_Prp9_C

SF3a60/Prp9 C-terminal

ClanCL0361C2H2-zf

External Links

AlphaFold DB: A0A175VSB5 UniProt: A0A175VSB5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 391-465