ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xi5D1 - ECOD Domain | ECOD

ECOD/Domains/e2xi5D1

e2xi5D1

UID: 000402317

PDB

Range: D:0-183
PDB: 2XI5 chain D(all domains)
UniProt: A5HC98 (all domains)
Gene: L

Molecule: RNA POLYMERASE L

3D Structure

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Related Domains

Browse other domains in L_protein_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyL_protein_N(2008.1.1.65)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF15518L_protein_N

L protein N-terminus

ClanCL0236PDDEXK

External Links

ECOD PDB View: 2XI5 RCSB PDB: 2XI5 PDBe: 2XI5 UniProt: A5HC98

Downloads

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