ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3kumD2 - ECOD Domain | ECOD

ECOD/Domains/e3kumD2

e3kumD2

UID: 000402396

PDB

Range: D:125-354
PDB: 3KUM chain D(all domains)
UniProt: Q834W6 (all domains)
Gene: EF_1511

Molecule: Dipeptide Epimerase

3D Structure

Loading viewer...

Related Domains

Browse other domains in MR_MLE_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyMR_MLE_C(2002.1.1.174)

Ligands

in contact, ≤ 4 Å

ArginineARG
Magnesium ionMG
metal
TyrosineTYR

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13378MR_MLE_C

Enolase C-terminal domain-like

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3KUM RCSB PDB: 3KUM PDBe: 3KUM UniProt: Q834W6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure