ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8I715_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8I715_F1_nD1

Q8I715_F1_nD1

UID: 004024866

AlphaFold

Range: 316-555
AlphaFold: AF-Q8I715
UniProt: Q8I715 (all domains)
Gene: PF3D7_1018000

Protein: tRNA pseudouridine(55) synthase (EC 5.4.99.25)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TruB_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyTruB_N(304.102.1.4)

Pfam Families

TruB family pseudouridylate synthase (N terminal domain)

ClanCL0649PseudoU_synth

External Links

AlphaFold DB: Q8I715 UniProt: Q8I715

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 316-555