ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3okyB1 - ECOD Domain | ECOD

ECOD/Domains/e3okyB1

e3okyB1

UID: 000402746

PDB

Range: B:20-506
PDB: 3OKY chain B(all domains)
UniProt: O35464 (all domains)
Gene: Sema6a

Molecule: Putative uncharacterized protein

3D Structure

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Related Domains

Browse other domains in Sema →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilySema(5.1.4.12)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

Sema domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 3OKY RCSB PDB: 3OKY PDBe: 3OKY UniProt: O35464

Downloads

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Drug annotations from DrugDomain.