ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3oyrB1 - ECOD Domain | ECOD

ECOD/Domains/e3oyrB1

e3oyrB1

UID: 000402809

PDB

Range: B:8-335
PDB: 3OYR chain B(all domains)
UniProt: Q9A6I1 (all domains)
Gene: CC_2113

Molecule: Trans-isoprenyl diphosphate synthase

3D Structure

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Related Domains

Browse other domains in polyprenyl_synt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilypolyprenyl_synt(141.1.1.1)

Ligands

in contact, ≤ 4 Å

Dimethylallyl DiphosphateDMA
drugDrugBank DB01785within 5 Å only
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF00348polyprenyl_synt

Polyprenyl synthetase

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 3OYR RCSB PDB: 3OYR PDBe: 3OYR UniProt: Q9A6I1

Downloads

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