ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3p4tB3 - ECOD Domain | ECOD

ECOD/Domains/e3p4tB3

e3p4tB3

UID: 000403849

PDB

Range: B:250-403
PDB: 3P4T chain B(all domains)
UniProt: A0R3J1 (all domains)
Gene: MSMEG_5491

Molecule: Putative acyl-CoA dehydrogenase

3D Structure

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Related Domains

Browse other domains in Acyl-CoA_dh_1 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupAcyl-CoA dehydrogenase C-terminal domain-like(633.6)

TT-groupAcyl-CoA dehydrogenase C-terminal domain-like(633.6.1)

FFamilyAcyl-CoA_dh_1(633.6.1.1)

Ligands

in contact, ≤ 4 Å

[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3S,4S)-5-[(4aS,10aR)-7,8-dimethyl-2,4-dioxo-1,3,4,4a,5,10a-hexahydrobenzo[g]pteridin-10(2H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphateFAO

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer.

Pfam Families

PF00441Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

ClanCL0087Acyl-CoA_dh

External Links

ECOD PDB View: 3P4T RCSB PDB: 3P4T PDBe: 3P4T UniProt: A0R3J1

Downloads

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Drug annotations from DrugDomain.