ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A4FW99_nD1 - ECOD Domain | ECOD

ECOD/Domains/A4FW99_nD1

A4FW99_nD1

UID: 004039452

AlphaFold

Range: 1-160
AlphaFold: AF-A4FW99
UniProt: A4FW99 (all domains)
Gene: MmarC5_0153

Protein: tRNA (cytidine(56)-2'-O)-methyltransferase (EC 2.1.1.206) (tRNA ribose 2'-O-methyltransferase aTrm56)

3D Structure

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Related Domains

Browse other domains in Trm56 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilyTrm56(2488.1.1.4)

Pfam Families

tRNA ribose 2'-O-methyltransferase, aTrm56

ClanCL0098SPOUT

External Links

AlphaFold DB: A4FW99 UniProt: A4FW99

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-160