ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3kgqA1 - ECOD Domain | ECOD

ECOD/Domains/e3kgqA1

e3kgqA1

UID: 000403951

PDB

Range: A:3-305
PDB: 3KGQ chain A(all domains)
UniProt: P00730 (all domains)
Gene: CPA1

Molecule: Carboxypeptidase A1

3D Structure

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Related Domains

Browse other domains in Peptidase_M14 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyPeptidase_M14(2011.1.1.1)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
Zinc ionZN
metal

+ 4 additives (Citric acid, Formic acid, Glycerin, …)

Citric acidCIT

Pfam Families

PF00246Peptidase_M14

Zinc carboxypeptidase

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 3KGQ RCSB PDB: 3KGQ PDBe: 3KGQ UniProt: P00730

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB04272

Formic acidFMT

DrugBank DB01942

GlycerinGOL

DrugBank DB09462

AcetoneACN

Shown in the structure viewer. Drug annotations from DrugDomain.