ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A6VH11_nD1 - ECOD Domain | ECOD

ECOD/Domains/A6VH11_nD1

A6VH11_nD1

UID: 004041448

AlphaFold

Range: 1-160
AlphaFold: AF-A6VH11
UniProt: A6VH11 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Trm56 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilyTrm56(2488.1.1.4)

Pfam Families

tRNA ribose 2'-O-methyltransferase, aTrm56

ClanCL0098SPOUT

External Links

AlphaFold DB: A6VH11 UniProt: A6VH11

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-160