ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3mshA1 - ECOD Domain | ECOD

ECOD/Domains/e3mshA1

e3mshA1

UID: 000404923

PDB

Range: A:1-90
PDB: 3MSH chain A(all domains)
UniProt: O43504 (all domains)
Gene: LAMTOR5

Molecule: Hepatitis B virus X-interacting protein

3D Structure

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Related Domains

Browse other domains in LAMTOR5 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupprofilin-like(223.2)

TT-groupprofilin-like(223.2.1)

FFamilyLAMTOR5(223.2.1.16)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 4 additives (Glycerin, Isopropyl alcohol, Phosphate ion, …)

GlycerinGOL
DrugBank DB09462
Isopropyl alcoholIPA
DrugBank DB02325
Phosphate ion

Pfam Families

PF16672LAMTOR5

Ragulator complex protein LAMTOR5

ClanCL0431PF

External Links

ECOD PDB View: 3MSH RCSB PDB: 3MSH PDBe: 3MSH UniProt: O43504

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.