ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ko6B1 - ECOD Domain | ECOD

ECOD/Domains/e3ko6B1

e3ko6B1

UID: 000405534

PDB

Range: B:4-179
PDB: 3KO6 chain B(all domains)
UniProt: P36088 (all domains)
Gene: YKL069W

Molecule: UPF0067 GAF domain-containing protein YKL069W

3D Structure

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Related Domains

Browse other domains in GAF →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilyGAF(223.1.1.3)

Ligands

in contact, ≤ 4 Å

L-methionine (R)-S-oxideSME
drugDrugBank DB02235

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

GAF domain

ClanCL0161GAF

External Links

ECOD PDB View: 3KO6 RCSB PDB: 3KO6 PDBe: 3KO6 UniProt: P36088

Downloads

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