ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xgbA1 - ECOD Domain | ECOD

ECOD/Domains/e2xgbA1

e2xgbA1

UID: 000406964

PDB

Range: A:4-489
PDB: 2XGB chain A(all domains)
UniProt: P16098 (all domains)
Gene: BMY1

Molecule: BETA-AMYLASE

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_14 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_14(2002.1.1.64)

Ligands

in contact, ≤ 4 Å

(2R)-oxiran-2-ylmethyl alpha-D-glucopyranosideEPG

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01373Glyco_hydro_14

Glycosyl hydrolase family 14

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 2XGB RCSB PDB: 2XGB PDBe: 2XGB UniProt: P16098

Downloads

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