ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3leeF1 - ECOD Domain | ECOD

ECOD/Domains/e3leeF1

e3leeF1

UID: 000407147

PDB

Range: F:38-216,F:265-370
PDB: 3LEE chain F(all domains)
UniProt: P37268 (all domains)
Gene: FDFT1

Molecule: Squalene synthetase

3D Structure

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Related Domains

Browse other domains in SQS_PSY →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilySQS_PSY(141.1.1.2)

Ligands

in contact, ≤ 4 Å

(1R)-4-(3-phenoxyphenyl)-1-phosphonobutane-1-sulfonic acidB65
drugDrugBank DB07420
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00494SQS_PSY

Squalene/phytoene synthase

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 3LEE RCSB PDB: 3LEE PDBe: 3LEE UniProt: P37268

Downloads

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