ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3pa8B1 - ECOD Domain | ECOD

ECOD/Domains/e3pa8B1

e3pa8B1

UID: 000408266

PDB

Range: B:10-251
PDB: 3PA8 chain B(all domains)
UniProt: Q189K3 (all domains)
Gene: tcdB

Molecule: Toxin B

3D Structure

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Related Domains

Browse other domains in Peptidase_C80 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupCaspase-like(7575)

HH-groupCaspase-like(7575.1)

TT-groupCaspase-like(7575.1.1)

FFamilyPeptidase_C80(7575.1.1.6)

Ligands

in contact, ≤ 4 Å

Phytic acidIHP
drugDrugBank DB14981
N-acetylglycyl-N-[(3S)-1-hydroxy-5-methyl-2-oxohexan-3-yl]-L-serinamide621
Sodium ionNA

Pfam Families

PF11713Peptidase_C80

Peptidase C80 family

ClanCL0093Peptidase_CD

External Links

ECOD PDB View: 3PA8 RCSB PDB: 3PA8 PDBe: 3PA8 UniProt: Q189K3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Calcium ionCA

metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.