ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3olaM2 - ECOD Domain | ECOD

ECOD/Domains/e3olaM2

e3olaM2

UID: 000408581

PDB

Range: M:1-368
PDB: 3OLA chain M(all domains)
UniProt: B3VQP5 (all domains)

Molecule: Polymerase

3D Structure

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Related Domains

Browse other domains in RdRP_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRdRP_1(304.48.1.8)

Ligands

in contact, ≤ 4 Å

2'-Deoxycytidine 5'-triphosphateDCP
drugDrugBank DB03258
Zinc ionZN
metal

+ 1 additive (Isopropyl alcohol)

Pfam Families

Viral RNA-dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 3OLA RCSB PDB: 3OLA PDBe: 3OLA UniProt: B3VQP5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Isopropyl alcoholIPA

DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.