ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3olbM2 - ECOD Domain | ECOD

ECOD/Domains/e3olbM2

e3olbM2

UID: 000408589

PDB

Range: M:1-368
PDB: 3OLB chain M(all domains)
UniProt: B3VQP5 (all domains)

Molecule: Polymerase

3D Structure

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Related Domains

Browse other domains in RdRP_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRdRP_1(304.48.1.8)

Ligands

in contact, ≤ 4 Å

2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATEDCT
Zinc ionZN
metal

+ 1 additive (Isopropyl alcohol)

Isopropyl alcoholIPA

Pfam Families

Viral RNA-dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 3OLB RCSB PDB: 3OLB PDBe: 3OLB UniProt: B3VQP5

Downloads

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DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.