ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5PJK8_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5PJK8_nD1

Q5PJK8_nD1

UID: 004092932

AlphaFold

Range: 18-145,306-390
AlphaFold: AF-Q5PJK8
UniProt: Q5PJK8 (all domains)

3D Structure

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Related Domains

Browse other domains in Bacterial extracellular solute-binding protein / Bacterial extracellular solute-binding protein →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyBacterial extracellular solute-binding protein / Bacterial extracellular solute-binding protein(7523.1.1.9)

Pfam Families

PF01547SBP_bac_1

Bacterial extracellular solute-binding protein

ClanCL0177PBP

PF13416SBP_bac_8

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

AlphaFold DB: Q5PJK8 UniProt: Q5PJK8

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 18-145,306-390