ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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B1XDL5_nD2 - ECOD Domain | ECOD

ECOD/Domains/B1XDL5_nD2

B1XDL5_nD2

UID: 004107877

AlphaFold

Range: 76-175
AlphaFold: AF-B1XDL5
UniProt: B1XDL5 (all domains)

3D Structure

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Related Domains

Browse other domains in RLMM_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTHUMP domain-like(4143)

HH-groupTHUMP domain-like(4143.1)

TT-groupTHUMP domain-like(4143.1.1)

FFamilyRLMM_N(4143.1.1.5)

Pfam Families

Ribosomal RNA large subunit methyltransferase M, N-terminal

ClanCL0747THUMP

External Links

AlphaFold DB: B1XDL5 UniProt: B1XDL5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 76-175