ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3abwB1 - ECOD Domain | ECOD

ECOD/Domains/e3abwB1

e3abwB1

UID: 000411296

PDB

Range: B:18-276
PDB: 3ABW chain B(all domains)
UniProt: Q3ITX1 (all domains)

Molecule: Halorhodopsin

3D Structure

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Related Domains

Browse other domains in Bac_rhodopsin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFamily A G protein-coupled receptor-like(5001)

HH-groupFamily A G protein-coupled receptor-like(5001.1)

TT-groupFamily A G protein-coupled receptor-like(5001.1.1)

FFamilyBac_rhodopsin(5001.1.1.6)

Ligands

in contact, ≤ 4 Å

(2S)-2,3-bis{[(3R,7R)-3,7,11,15-tetramethylhexadecyl]oxy}propyl (2R)-2-hydroxy-3-[(hydroxyphosphinato)oxy]propyl phosphateL3P
drugDrugBank DB02293
Bacterioruberin22B
Azide ion

Pfam Families

PF01036Bac_rhodopsin

Bacteriorhodopsin-like protein

ClanCL0192GPCR_A

External Links

ECOD PDB View: 3ABW RCSB PDB: 3ABW PDBe: 3ABW UniProt: Q3ITX1

Downloads

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RetinalRET

Shown in the structure viewer. Drug annotations from DrugDomain.