ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2q80A1 - ECOD Domain | ECOD

ECOD/Domains/e2q80A1

e2q80A1

UID: 000004114

RepresentativePDB

Range: A:6-296
PDB: 2Q80 chain A(all domains)
UniProt: O95749 (all domains)
Gene: GGPS1

Molecule: Geranylgeranyl pyrophosphate synthetase

3D Structure

Loading viewer...

Related Domains

Browse other domains in polyprenyl_synt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilypolyprenyl_synt(141.1.1.1)

Ligands

in contact, ≤ 4 Å

Geranylgeranyl diphosphateGRG
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00348polyprenyl_synt

Polyprenyl synthetase

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 2Q80 RCSB PDB: 2Q80 PDBe: 2Q80 UniProt: O95749

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure