ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5FM72_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5FM72_nD1

Q5FM72_nD1

UID: 004117116

AlphaFold

Range: 6-45,66-145
AlphaFold: AF-Q5FM72
UniProt: Q5FM72 (all domains)
Gene: rplO

Protein: Large ribosomal subunit protein uL15 (50S ribosomal protein L15)

3D Structure

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Related Domains

Browse other domains in Ribosomal_L27A, Ribosomal_uL15_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRibosomal protein L13/L15p/L18e/L32e(2490)

HH-groupRibosomal proteins L15p and L18e(2490.3)

TT-groupRibosomal proteins L15p and L18e(2490.3.1)

FFamilyRibosomal_L27A, Ribosomal_uL15_N(2490.3.1.3)

Pfam Families

PF00828Ribosomal_L27A

Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A

ClanCL0588Ribos_L15p_L18e

PF29471Ribosomal_uL15_N

Ribosomal protein uL15, N-terminal region

External Links

AlphaFold DB: Q5FM72 UniProt: Q5FM72

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-45,66-145