ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3omiB2 - ECOD Domain | ECOD

ECOD/Domains/e3omiB2

e3omiB2

UID: 000411712

PDB

Range: B:130-285
PDB: 3OMI chain B(all domains)
UniProt: Q3J5G0 (all domains)
Gene: coxII

Molecule: Cytochrome c oxidase subunit 2

3D Structure

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Related Domains

Browse other domains in COX2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupCupredoxin-like(3156)

HH-groupCupredoxin-related(3156.1)

TT-groupCupredoxin-related(3156.1.1)

FFamilyCOX2(3156.1.1.1)

Ligands

in contact, ≤ 4 Å

COPPER (II) IONCU
metalwithin 5 Å only
COPPER (I) IONCU1
metalwithin 5 Å only
(2S,3R)-heptane-1,2,3-triol

Pfam Families

Cytochrome C oxidase subunit II, periplasmic domain

ClanCL0026CU_oxidase

External Links

ECOD PDB View: 3OMI RCSB PDB: 3OMI PDBe: 3OMI UniProt: Q3J5G0

Downloads

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within 5 Å only

Magnesium ionMG

metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.