ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ae5D1 - ECOD Domain | ECOD

ECOD/Domains/e3ae5D1

e3ae5D1

UID: 000411980

PDB

Range: D:35-136
PDB: 3AE5 chain D(all domains)
UniProt: A5GZW8 (all domains)
Gene: SDHD

Molecule: Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial

3D Structure

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Related Domains

Browse other domains in CybS →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTransmembrane heme-binding four-helical bundle(5069)

HH-groupTransmembrane heme-binding four-helical bundle(5069.1)

TT-groupFumarate reductase respiratory complex transmembrane subunits(5069.1.3)

FFamilyCybS(5069.1.3.4)

Ligands

in contact, ≤ 4 Å

L-Alpha-Phosphatidyl-Beta-Oleoyl-Gamma-Palmitoyl-PhosphatidylethanolamineEPH
drugDrugBank DB03047
FerrohemeHEM
drugDrugBank DB18267

Pfam Families

CybS, succinate dehydrogenase cytochrome B small subunit

ClanCL0335FumRed-TM

External Links

ECOD PDB View: 3AE5 RCSB PDB: 3AE5 PDBe: 3AE5 UniProt: A5GZW8

Downloads

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2-methyl-N-[3-(1-methylethoxy)phenyl]benzamideMRN

Shown in the structure viewer. Drug annotations from DrugDomain.