ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5PDG5_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5PDG5_nD2

Q5PDG5_nD2

UID: 004133302

AlphaFold

Range: 151-250
AlphaFold: AF-Q5PDG5
UniProt: Q5PDG5 (all domains)

3D Structure

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Related Domains

Browse other domains in SBP_bac_5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupOligo-peptide binding protein (OPPA) insertion domain(304.136)

TT-groupOligo-peptide binding protein (OPPA) insertion domain(304.136.1)

FFamilySBP_bac_5(304.136.1.1)

Pfam Families

PF00496SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

ClanCL0177PBP

External Links

AlphaFold DB: Q5PDG5 UniProt: Q5PDG5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 151-250