ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3lktD1 - ECOD Domain | ECOD

ECOD/Domains/e3lktD1

e3lktD1

UID: 000413337

PDB

Range: D:1-200
PDB: 3LKT chain D(all domains)
UniProt: P00436 (all domains)
Gene: pcaG

Molecule: Protocatechuate 3,4-dioxygenase alpha chain

3D Structure

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Related Domains

Browse other domains in Dioxygenase_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupPrealbumin-like(11.1.4)

FFamilyDioxygenase_C(11.1.4.4)

Ligands

in contact, ≤ 4 Å

Beta-mercaptoethanolBME

+ 2 additives (Sulfate ion, Tromethamine)

Sulfate ionSO4
DrugBank DB14546
TromethamineTRS

Pfam Families

PF00775Dioxygenase_C

Dioxygenase

ClanCL0287Transthyretin

External Links

ECOD PDB View: 3LKT RCSB PDB: 3LKT PDBe: 3LKT UniProt: P00436

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.