ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3oqhB1 - ECOD Domain | ECOD

ECOD/Domains/e3oqhB1

e3oqhB1

UID: 000413413

PDB

Range: B:11-235
PDB: 3OQH chain B(all domains)
UniProt: Q65EX3 (all domains)
Gene: yvmC

Molecule: Putative uncharacterized protein yvmC

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilyCDPS(2005.1.1.31)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Cyclodipeptide synthase

ClanCL0039HUP

External Links

ECOD PDB View: 3OQH RCSB PDB: 3OQH PDBe: 3OQH UniProt: Q65EX3

Downloads

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