ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3oqjB1 - ECOD Domain | ECOD

ECOD/Domains/e3oqjB1

e3oqjB1

UID: 000413417

PDB

Range: B:13-234
PDB: 3OQJ chain B(all domains)
UniProt: Q65EX3 (all domains)
Gene: yvmC

Molecule: Putative uncharacterized protein yvmC

3D Structure

Loading viewer...

Related Domains

Browse other domains in CDPS →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilyCDPS(2005.1.1.31)

Ligands

in contact, ≤ 4 Å

(2S)-3-(cyclohexylamino)-2-hydroxypropane-1-sulfonic acid3CX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Cyclodipeptide synthase

ClanCL0039HUP

External Links

ECOD PDB View: 3OQJ RCSB PDB: 3OQJ PDBe: 3OQJ UniProt: Q65EX3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure