ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3q0aB3 - ECOD Domain | ECOD

ECOD/Domains/e3q0aB3

e3q0aB3

UID: 000413510

PDB

Range: B:445-550
PDB: 3Q0A chain B(all domains)
UniProt: Q859P9 (all domains)
Gene: 50

Molecule: Virion RNA polymerase

3D Structure

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Related Domains

Browse other domains in vRNAP_plug →

Classification

AArchitecturealpha arrays(a.6)

XX-groupinserted helical bundle subdomain in T7 RNA polymerase(4966)

HH-groupinserted helical bundle subdomain in T7 RNA polymerase(4966.1)

TT-groupinserted helical bundle subdomain in T7 RNA polymerase(4966.1.1)

FFamilyvRNAP_plug(4966.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21624vRNAP_plug

Virion DNA-directed RNA polymerase, plug insertion

External Links

ECOD PDB View: 3Q0A RCSB PDB: 3Q0A PDBe: 3Q0A UniProt: Q859P9

Downloads

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