ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F3X4_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q5F3X4_nD5

Q5F3X4_nD5

UID: 004137260

AlphaFold

Range: 826-965
AlphaFold: AF-Q5F3X4
UniProt: Q5F3X4 (all domains)
Gene: EFTUD2

Protein: 116 kDa U5 small nuclear ribonucleoprotein component (Elongation factor Tu GTP-binding domain protein 2) (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa)

3D Structure

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Related Domains

Browse other domains in EFG_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupEF-G C-terminal domain-like(304.24)

TT-groupEF-G C-terminal domain-like(304.24.1)

FFamilyEFG_C(304.24.1.1)

Pfam Families

Elongation factor G C-terminus

ClanCL0437EF-G_C

External Links

AlphaFold DB: Q5F3X4 UniProt: Q5F3X4

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 826-965