ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3q9cB1 - ECOD Domain | ECOD

ECOD/Domains/e3q9cB1

e3q9cB1

UID: 000413941

PDB

Range: B:1-341
PDB: 3Q9C chain B(all domains)
UniProt: Q48935 (all domains)
Gene: aphA

Molecule: Acetylpolyamine amidohydrolase

3D Structure

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Related Domains

Browse other domains in Hist_deacetyl →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupArginase/deacetylase(2006.1.5)

FFamilyHist_deacetyl(2006.1.5.2)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metal
Sodium ionNA
metal
N-{4-[(3-aminopropyl)amino]butyl}acetamideQ9C

Pfam Families

PF00850Hist_deacetyl

Histone deacetylase domain

ClanCL0302Arginase

External Links

ECOD PDB View: 3Q9C RCSB PDB: 3Q9C PDBe: 3Q9C UniProt: Q48935

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Zinc ionZN

metal

Shown in the structure viewer. Drug annotations from DrugDomain.