ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q9YAD3_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9YAD3_nD1

Q9YAD3_nD1

UID: 004152176

AlphaFold

Range: 6-160
AlphaFold: AF-Q9YAD3
UniProt: Q9YAD3 (all domains)

3D Structure

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Related Domains

Browse other domains in Trm56 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilyTrm56(2488.1.1.4)

Pfam Families

tRNA ribose 2'-O-methyltransferase, aTrm56

ClanCL0098SPOUT

External Links

AlphaFold DB: Q9YAD3 UniProt: Q9YAD3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-160