ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2y80A1 - ECOD Domain | ECOD

ECOD/Domains/e2y80A1

e2y80A1

UID: 000415332

PDB

Range: A:16-245
PDB: 2Y80 chain A(all domains)
UniProt: P00742 (all domains)
Gene: F10

Molecule: ACTIVATED FACTOR XA HEAVY CHAIN

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

6-CHLORO-N-{(3S)-1-[(1S)-1-(DIMETHYLAMINO)-2,3-DIHYDRO-1H-INDEN-5-YL]-2-OXO-3-PYRROLIDINYL}-2-NAPHTHALENESULFONAMIDE439
Calcium ionCA
metal
Magnesium ionMG

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 2Y80 RCSB PDB: 2Y80 PDBe: 2Y80 UniProt: P00742

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.