ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3om4C1 - ECOD Domain | ECOD

ECOD/Domains/e3om4C1

e3om4C1

UID: 000415626

PDB

Range: C:34-481
PDB: 3OM4 chain C(all domains)
UniProt: D5DC07 (all domains)
Gene: sacB

Molecule: Levansucrase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_68 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group5-bladed(5.1.2)

FFamilyGlyco_hydro_68(5.1.2.5)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 3 additives (Triethylene glycol, Sulfate ion, Tetraethylene glycol)

Triethylene glycolPGE
DrugBank DB02327
Sulfate ion

Pfam Families

PF02435Glyco_hydro_68

Levansucrase/Invertase

ClanCL0143B_Fructosidase

External Links

ECOD PDB View: 3OM4 RCSB PDB: 3OM4 PDBe: 3OM4 UniProt: D5DC07

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.