ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3om5B1 - ECOD Domain | ECOD

ECOD/Domains/e3om5B1

e3om5B1

UID: 000415629

PDB

Range: B:34-481
PDB: 3OM5 chain B(all domains)
UniProt: D5DC07 (all domains)
Gene: sacB

Molecule: Levansucrase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Glyco_hydro_68 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group5-bladed(5.1.2)

FFamilyGlyco_hydro_68(5.1.2.5)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Hexaethylene glycolP6G

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02435Glyco_hydro_68

Levansucrase/Invertase

ClanCL0143B_Fructosidase

External Links

ECOD PDB View: 3OM5 RCSB PDB: 3OM5 PDBe: 3OM5 UniProt: D5DC07

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure