ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3qxbC1 - ECOD Domain | ECOD

ECOD/Domains/e3qxbC1

e3qxbC1

UID: 000415787

PDB

Range: C:1-295
PDB: 3QXB chain C(all domains)
UniProt: Q2RUN2 (all domains)
Gene: Rru_A1362

Molecule: Putative Xylose isomerase

3D Structure

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Related Domains

Browse other domains in AP_endonuc_2 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAP_endonuc_2(2002.1.1.60)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
FE (III) IONFE
metal
MANGANESE (II) IONMN

Pfam Families

PF01261AP_endonuc_2

Xylose isomerase-like TIM barrel

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3QXB RCSB PDB: 3QXB PDBe: 3QXB UniProt: Q2RUN2

Downloads

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metal

+ 2 additives (Acetate, 1,2-ETHANEDIOL)

AcetateACT
DrugBank DB14511
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.