ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3q2hB1 - ECOD Domain | ECOD

ECOD/Domains/e3q2hB1

e3q2hB1

UID: 000416252

PDB

Range: B:4-223
PDB: 3Q2H chain B(all domains)
UniProt: Q9UHI8 (all domains)
Gene: ADAMTS1

Molecule: A disintegrin and metalloproteinase with thrombospondin motifs 1

3D Structure

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Related Domains

Browse other domains in Reprolysin →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyReprolysin(2498.1.1.4)

Ligands

in contact, ≤ 4 Å

Cadmium ionCD
metal
Magnesium ionMG
metal
Sodium ionNA

Pfam Families

PF01421Reprolysin

Reprolysin (M12B) family zinc metalloprotease

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 3Q2H RCSB PDB: 3Q2H PDBe: 3Q2H UniProt: Q9UHI8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

NICKEL (II) IONNI

metal

N-[(2S,4S)-1-({4-[2-(3,5-dimethyl-1,2-oxazol-4-yl)ethyl]piperidin-1-yl}sulfonyl)-4-(5-fluoropyrimidin-2-yl)-2-methylpentan-2-yl]-N-hydroxyformamideQHF

Zinc ionZN

metal

Shown in the structure viewer. Drug annotations from DrugDomain.