ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xzoA1 - ECOD Domain | ECOD

ECOD/Domains/e2xzoA1

e2xzoA1

UID: 000416416

PDB

Range: A:292-322,A:415-699
PDB: 2XZO chain A(all domains)
UniProt: Q92900 (all domains)
Gene: UPF1

Molecule: REGULATOR OF NONSENSE TRANSCRIPTS 1

3D Structure

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Related Domains

Browse other domains in AAA_11 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA_11(2004.1.1.184)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Tetrafluoroaluminate IonALF
drugDrugBank DB04444

Pfam Families

AAA domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 2XZO RCSB PDB: 2XZO PDBe: 2XZO UniProt: Q92900

Downloads

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Magnesium ion

metal

+ 1 additive (Pentaethylene glycol)

Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.