ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3mnnH1 - ECOD Domain | ECOD

ECOD/Domains/e3mnnH1

e3mnnH1

UID: 000416504

PDB

Range: H:28-122
PDB: 3MNN chain H(all domains)
UniProt: P02281 (all domains)

Molecule: Histone H2B 1.1

3D Structure

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Related Domains

Browse other domains in Histone →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupHistone(148.1.1)

FFamilyHistone(148.1.1.1)

Ligands

in contact, ≤ 4 Å

1-methyl-4-(1-methylethyl)benzeneMML
1,3,5-triaza-7-phosphatricyclo[3.3.1.1~3,7~]decanePTW
Ruthenium ionRU

Pfam Families

PF00125Histone

Core histone H2A/H2B/H3/H4 domain

ClanCL0012Histone

External Links

ECOD PDB View: 3MNN RCSB PDB: 3MNN PDBe: 3MNN UniProt: P02281

Downloads

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metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.