ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3o5aB1 - ECOD Domain | ECOD

ECOD/Domains/e3o5aB1

e3o5aB1

UID: 000416535

PDB

Range: B:1-123
PDB: 3O5A chain B(all domains)
UniProt: P39186 (all domains)
Gene: napB

Molecule: Diheme cytochrome c napB

3D Structure

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Related Domains

Browse other domains in NapB →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupMultiheme cytochromes(139)

HH-groupDi-heme elbow motif(139.2)

TT-groupDi-heme elbow motif(139.2.1)

FFamilyNapB(139.2.1.3)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317
Chloride ionCL

+ 1 additive (Formic acid)

Formic acidFMT

Pfam Families

Nitrate reductase cytochrome c-type subunit (NapB)

ClanCL0317Multiheme_cytos

External Links

ECOD PDB View: 3O5A RCSB PDB: 3O5A PDBe: 3O5A UniProt: P39186

Downloads

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DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.