ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1pvlA1 - ECOD Domain | ECOD

ECOD/Domains/e1pvlA1

e1pvlA1

UID: 000041662

PDB

Range: A:1-299
PDB: 1PVL chain A(all domains)
UniProt: Q5FBD2 (all domains)
Gene: lukF-PV

Molecule: LEUCOCIDIN

3D Structure

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Related Domains

Browse other domains in Leukocidin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupLeukocidin-like(11.13)

TT-groupLeukocidin-like(11.13.1)

FFamilyLeukocidin(11.13.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (2-(N-morpholino)ethanesulfonic acid)

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07968Leukocidin

Leukocidin/Hemolysin toxin family

ClanCL0636Leukocidin

External Links

ECOD PDB View: 1PVL RCSB PDB: 1PVL PDBe: 1PVL UniProt: Q5FBD2

Downloads

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