ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xvlA5 - ECOD Domain | ECOD

ECOD/Domains/e2xvlA5

e2xvlA5

UID: 000417198

PDB

Range: A:413-787
PDB: 2XVL chain A(all domains)
UniProt: B3PBD9 (all domains)
Gene: xyl31A

Molecule: ALPHA-XYLOSIDASE, PUTATIVE, XYL31A

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_31_2nd →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_31_2nd(2002.1.1.45)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
NICKEL (II) IONNI
metal
(2S)-1-[3-{[(2R)-2-hydroxypropyl]oxy}-2,2-bis({[(2R)-2-hydroxypropyl]oxy}methyl)propoxy]propan-2-olPXN

Pfam Families

PF01055Glyco_hydro_31_2nd

Glycosyl hydrolases family 31 TIM-barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 2XVL RCSB PDB: 2XVL PDBe: 2XVL UniProt: B3PBD9

Downloads

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+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.