ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3oc8A1 - ECOD Domain | ECOD

ECOD/Domains/e3oc8A1

e3oc8A1

UID: 000417536

PDB

Range: A:185-318
PDB: 3OC8 chain A(all domains)
UniProt: P0C6Q5 (all domains)
Gene: tcpF

Molecule: Toxin coregulated pilus biosynthesis protein F

3D Structure

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Related Domains

Browse other domains in TcpF →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyTcpF(11.1.1.87)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (1,4-Dioxane, Glycerin, Sulfate ion)

1,4-DioxaneDIO
DrugBank DB03316
GlycerinGOL
DrugBank DB09462
Sulfate ion

Pfam Families

Vibrio cholerae toxin co-regulated pilus biosynthesis protein F

External Links

ECOD PDB View: 3OC8 RCSB PDB: 3OC8 PDBe: 3OC8 UniProt: P0C6Q5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.