ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3rf1B1 - ECOD Domain | ECOD

ECOD/Domains/e3rf1B1

e3rf1B1

UID: 000417714

PDB

Range: B:1-284
PDB: 3RF1 chain B(all domains)
UniProt: A1VZ59 (all domains)
Gene: glyQ

Molecule: Glycyl-tRNA synthetase alpha subunit

3D Structure

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Related Domains

Browse other domains in tRNA-synt_2e →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2e(314.1.1.5)

Ligands

in contact, ≤ 4 Å

(2S)-2-hydroxybutanedioic acidLMR

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02091tRNA-synt_2e

Glycyl-tRNA synthetase alpha subunit

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 3RF1 RCSB PDB: 3RF1 PDBe: 3RF1 UniProt: A1VZ59

Downloads

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