ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9FBG4_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9FBG4_nD2

Q9FBG4_nD2

UID: 004180558

AlphaFold

Range: 66-345
AlphaFold: AF-Q9FBG4
UniProt: Q9FBG4 (all domains)
Gene: cfr

Protein: Ribosomal RNA large subunit methyltransferase Cfr (EC 2.1.1.224) (23S rRNA (adenine(2503)-C(8))-methyltransferase) (23S rRNA m8A2503 methyltransferase)

3D Structure

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Related Domains

Browse other domains in Radical_SAM →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM(2002.1.1.120)

Pfam Families

PF04055Radical_SAM

Radical SAM superfamily

ClanCL0036TIM_barrel

External Links

AlphaFold DB: Q9FBG4 UniProt: Q9FBG4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 66-345