ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3rhtD1 - ECOD Domain | ECOD

ECOD/Domains/e3rhtD1

e3rhtD1

UID: 000418205

PDB

Range: D:3-254
PDB: 3RHT chain D(all domains)
UniProt: D5SQH6 (all domains)
Gene: Plim_2614

Molecule: (GATase1)-like protein

3D Structure

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Related Domains

Browse other domains in GATase1_like →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupClass I glutamine amidotransferase-like(2007.1.1)

FFamilyGATase1_like(2007.1.1.9)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL

+ 2 additives (Acetate, Glycerin)

AcetateACT

Pfam Families

PF07090GATase1_like

Putative glutamine amidotransferase

ClanCL0014Glutaminase_I

External Links

ECOD PDB View: 3RHT RCSB PDB: 3RHT PDBe: 3RHT UniProt: D5SQH6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.