ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xwlB1 - ECOD Domain | ECOD

ECOD/Domains/e2xwlB1

e2xwlB1

UID: 000418245

PDB

Range: B:2-223
PDB: 2XWL chain B(all domains)
UniProt: A0R560 (all domains)
Gene: ispD

Molecule: 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE

3D Structure

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Related Domains

Browse other domains in IspD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyIspD(7516.1.1.5)

Ligands

in contact, ≤ 4 Å

Cytidine-5'-TriphosphateCTP
drugDrugBank DB02431
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

ClanCL0110GT-A

External Links

ECOD PDB View: 2XWL RCSB PDB: 2XWL PDBe: 2XWL UniProt: A0R560

Downloads

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