ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3r69B1 - ECOD Domain | ECOD

ECOD/Domains/e3r69B1

e3r69B1

UID: 000419677

PDB

Range: B:239-327
PDB: 3R69 chain B(all domains)
UniProt: Q9JIL4 (all domains)
Gene: Pdzk1

Molecule: Na(+)/H(+) exchange regulatory cofactor NHE-RF3, Scavenger receptor class B member 1

3D Structure

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Related Domains

Browse other domains in PDZ →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPDZ domain(7)

HH-groupPDZ domain(7.1)

TT-groupPDZ domain(7.1.1)

FFamilyPDZ(7.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PDZ domain

ClanCL0466PDZ-like

External Links

ECOD PDB View: 3R69 RCSB PDB: 3R69 PDBe: 3R69 UniProt: Q9JIL4

Downloads

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