ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3rrnA1 - ECOD Domain | ECOD

ECOD/Domains/e3rrnA1

e3rrnA1

UID: 000419754

PDB

Range: A:88-295
PDB: 3RRN chain A(all domains)
UniProt: P20449 (all domains)
Gene: DBP5

Molecule: ATP-dependent RNA helicase DBP5

3D Structure

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Related Domains

Browse other domains in DEAD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDEAD(2004.1.1.29)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Phytic acidIHP
drugDrugBank DB14981

Shown in the structure viewer.

Pfam Families

DEAD/DEAH box helicase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3RRN RCSB PDB: 3RRN PDBe: 3RRN UniProt: P20449

Downloads

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Drug annotations from DrugDomain.