ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3qtcA1 - ECOD Domain | ECOD

ECOD/Domains/e3qtcA1

e3qtcA1

UID: 000420345

PDB

Range: A:188-454
PDB: 3QTC chain A(all domains)
UniProt: Q8PWY1 (all domains)
Gene: pylS

Molecule: Pyrrolysyl-tRNA synthetase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_2d →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2d(314.1.1.3)

Ligands

in contact, ≤ 4 Å

O-methyl-L-tyrosine0A1
Phosphoaminophosphonic acid-adenylate esterANP
Magnesium ionMG

Pfam Families

PF01409tRNA-synt_2d

tRNA synthetases class II core domain (F)

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 3QTC RCSB PDB: 3QTC PDBe: 3QTC UniProt: Q8PWY1

Downloads

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metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.